PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0077s0430.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 438aa    MW: 49573.7 Da    PI: 6.6528
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0077s0430.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.23.5e-45511901128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                             lppG+rF P+d+elv++yL kkv+g +l++ + i +vdiy+++P+ L  +  +++ekew+fF++r++ky++g+r+nra+  gyWkat
  SapurV1A.0077s0430.1.p  51 LPPGYRFCPHDHELVMYYLDKKVKGLPLPM-NRIVNVDIYQFDPEFLSaRYNNHGEKEWFFFTPRSRKYRNGTRPNRAAGGGYWKAT 136
                             79****************************.77**************9344455788****************************** PP

                     NAM  87 gkdkevlsk............kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             g dk+v+ +            ++ +vg +k Lv+y+g+apkgekt+W+mhe+rl
  SapurV1A.0077s0430.1.p 137 GADKAVKYEknvigadnkikiQKITVGQRKALVYYNGKAPKGEKTNWIMHEFRL 190
                             ******9986666665555444444***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.8E-5246217IPR003441NAC domain
PROSITE profilePS5100550.52851217IPR003441NAC domain
PfamPF023652.5E-2352190IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MASNSPPVPP VPQPLSTINP PFQARSAFTS QPPPPQVFAN YQDTDRYFNS LPPGYRFCPH  60
DHELVMYYLD KKVKGLPLPM NRIVNVDIYQ FDPEFLSARY NNHGEKEWFF FTPRSRKYRN  120
GTRPNRAAGG GYWKATGADK AVKYEKNVIG ADNKIKIQKI TVGQRKALVY YNGKAPKGEK  180
TNWIMHEFRL DDPPLHVRNN RDDMRLDDCV LCRIYKKRGK RTNADTTVRV QQSNEEISLL  240
MTIEGNDEDF INEHGYDPNR LSAIEASFAG EIHGMITPPL ENSFPIHDEL SQQQTDPSGF  300
PDASNFYTLQ ASPIPGLEEA FGTPAPMDFF NSEDWFYTQM EHRDEFLMNP ANSSQYYNIP  360
DQFVNLYPTM STNLQTNPSP LVNIFPMNTA PAYGSLPPMS TAPLTAPLRP ANPASTHPTS  420
EMMNVAPNHP GQPPQHR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swp_D1e-505021819169NAC domain-containing protein 19
3swp_C1e-505021819169NAC domain-containing protein 19
3swp_B1e-505021819169NAC domain-containing protein 19
3swp_A1e-505021819169NAC domain-containing protein 19
3swm_D1e-505021819169NAC domain-containing protein 19
3swm_C1e-505021819169NAC domain-containing protein 19
3swm_B1e-505021819169NAC domain-containing protein 19
3swm_A1e-505021819169NAC domain-containing protein 19
4dul_B2e-505021816166NAC domain-containing protein 19
4dul_A2e-505021816166NAC domain-containing protein 19
1ut7_B2e-505021816166NO APICAL MERISTEM PROTEIN
1ut7_A2e-505021816166NO APICAL MERISTEM PROTEIN
1ut4_B2e-505021816166NO APICAL MERISTEM PROTEIN
1ut4_A2e-505021816166NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011045450.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLB9HNX91e-131B9HNX9_POPTR; Uncharacterized protein
STRINGPOPTR_0009s05690.11e-131(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101121642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.14e-56NAC family protein